Yes, I agree there are probably other factors in play with regard to the marketing of the sensors WRT MFDB. I can't speak for V shooters, but I have and do use the ixpress/CF backs ... and my take on the pixel count is that it really depends on what the use is if the extra pixels are a plus or a minus. I think the higher pixel backs produce a more film like look, not grain but tonality and color, obviously they can print larger too or be more highly cropped. The newer backs seem to have better ISO 200, 400, and 800. So these are advantages for higher pixel count backs, however for high contrast / high DR scenes, I think the older 9um backs do better ( at least at base ISO ) and they can handle movements on technical cameras or tilt shift lenses better. The new 80mp backs seem to have a lot of problems with color casts even without any movement. They are just much more sensitive. Another advantage that could go to the smaller backs is file size - much easier to work, store and ftp the smaller files. The MFDB makers have advertised improved color on each new back, but I'm not sure its there or not. I didn't post images, but the other month I compared a hasselblad CF 528 vs the AFI-ii 12 using the same lens on both cameras. I shot a white plate with a stack of peaches on it. You can imagine how the color of peaches is not uniform but subtly changing between tones of orange and yellow about the surface and they are covered with many fine hairs. Both cameras recorded the hairs very well but the 528 did much better on capturing the ranges of color and for lack of a better word, texture of the skin. If I were shooting food or flowers in the studio (where I could shoot at base ISO) or landscapes using a tripod, I might opt for an older 9um sensor back. I'm not saying the AFi-ii 12 is bad at all. I like it, but I think under some circumstances its beaten by the older 528. So long story short, to answer your question, yes under some circumstances the 39mp or even 22mp sensor backs would be preferable to the 50mp. No question the chip makers and MFDB makers have continued to learn how to make better and better chips and electronics. I'd be really curious to see what they could do with a larger pitch sensor today instead of concentrating on higher pixel densities.
Anyhow back to the topic - when I bought my CF-ii 39MS in Feb of this year, I was told that it might be one of the last ones and that Hasseblad might stop offering CF backs. It's really a shame because if you have an older camera and set of lenses that you like to use, you are running out of options.