If I understand your question, you have the OS (win7?) on the 60GB SSD and you wanted that for your scratch drive? You wanted the OS on the 2TB drive.
Easy way to resolve, buy Acronis, image the current drive with the OS, reboot and tell Acronis to recover the
image of the drive (60GB SSD) to the 2TB hard drive. Make sure you tell Acronis NOT to keep the disk signature, but YES to Master boot record. These steps are critical. No other way I know of to move, you can't just copy the files, (if windows). Other way would be a total reload from the copy of the OS. Acronis is very easy to use and not that expensive. Good backup tool for future use also.
Paul Caldwell