The half press shutter for OIS is one way to operate, however the noise that the lens makes all the time is no OIS, but something else. No setting I have found will make that lens be quiet, just like the 50-140. In fact most Fuji lenses do this, but they are much quieter.
The 50-140 indoors as soon as the camera is turn ON, you will hear a noise, no matter what you have OIS set to, on off, half press etc. In fact OIS is very quiet, you can't really hear it. With Canon or Nikon lenses you can always hear the IR or VR engage.
Fuji doesn't want to talk much about the motor noise, I have called them on the 50-140 2x. It just runs all the time and thus will effect your battery life in a negative way. The 100-400 follows the same method of running all the time (by running I don't mean OIS). Even putting the camera in manual focus mode doesn't kill the motor. True with X-Pro2 and X-T1 at least from my experience.
Outdoors in normal conditions, you most likely won't hear the sound, but indoors at least on my lenses, it's pretty noticeable. The only issue I have with it, is the extra drain on the battery especially on the X-Pro2 which doesn't have the same life per cell as the X-T1.
Paul C