I have begun looking at using Thomas Fors' ACR Calibrator for my 5D. As I was sorting out the procedure, I found no mention of measuring the Colorchecker being photographed.
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You are correct that the issue of the actual values of the chart being used is relevant.
Undoubtedly, there will be variations. However, for most people, taking measurements is both impossible and impractical.
Much better is to use BabelColor's excellent tables of average measurements, taken from 20 charts.
You can download the results and print them off from here>
[a href=\"http://www.babelcolor.com/main_level/ColorChecker.htm#ColorChecker_data]http://www.babelcolor.com/main_level/Color...lorChecker_data[/url]
Scroll down to the section headed "ColorChecker" data and click on "ColorChecker data and spectral.xls."
I convert everything to Adobe 1998 16bit TIFF and find the values excellent.
Two final points.......
1. I shoot fine art for a living and, in terms of achieving superb colour accuracy ( by this I mean making a proof print and viewing it and the original artwork in the same light.) in RGB is the least of your problems. The real problems arise at the CMYK stage.
2. Your question really belongs in Digital Image Processing and you might have received a lot more replies if you had posted it there. ;-)
D.