I came across a specific need for HDR, when copying transparancies with a digital camera and a macro lens the dark areas are dense and need often to be pushed in post, making the digital camera noise show.
My plan was to make a virtually noise-free 16 bit TIF with no clipped highlights, but highlights just touching file saturation (65535), leaving as much space for the shadows as possible. A 5Dmk2 cannot do this in one shot (too noisy shadows), so HDR is needed.
I don't want fancy grunge-looking tonemapping. No non-linearity at all, just the same image as a perfectly ETTR exposed single shot, but with much less shadow noise.
The problem seem to be though that HDR software I have tested is poor at merging exposures -- they don't seem to understand that clipped pixels should be 100% ignored, and possibly don't realize that the topmost stops are the least noisy out of a digital camera. I succeed in getting less shadow noise, but highlights always suffer, they get worse than the best non-clipped ETTR shot from the bracketed shots.
Many HDR softwares are also not designed for making it possible to produce neutral results, so I'm kind of stuck. Any ideas?
I've tried picturenaut, sns-hdr, hugin hdrmerge, luminance hdr.