I am surprised there is no automatic calculation of the number of captures required. If the start and end points are fixed, as well as the f/stop, lens, and camera back, one could calculate the number of captures required for a given "sharpness quality" ( C1 would probably have to implement a high, medium and low quality setting as acceptable sharpness falloff is by definition subjective). I assume an automatic calculation has not yet been implemented simply due to the time required to prepare the tables for all the lens/back/fstop combinations (an admittedly high number).
This leads me to a question: when the number of captures are set, are the captures equidistant from each other based on the motor steps(or some linear scale), or on the depth of field? As the plane of sharp focus recedes depth of field increases, after all. There does not seem to be any documentation and it would be important to know if the software automatically takes this into account when stacking.
Finally, the start and end points may not be precisely repeatable, at least from initial reports. It would be good to know what's happening. Are there stats available that indicate the precision through the focus stacking? One could reasonably assume that at some point, under very high magnification and with small f/stops, the step motor is not sufficiently accurate to run automatic focus stacking.