If I understood correctly, the original poster says the he is putting an 7200 RPM drive connected to USB3 or Thunderbolt, then the difference is 0, the drive it is the limiting factor here.
The macworld article referenced above it is wrong. They did not tested an USB 3 drive with support for UASP (
http://en.wikipedia.org/wiki/USB_Attached_SCSI ). As you can read here:
http://forums.macrumors.com/showthread.php?t=1712510 using a UASP enclosure with a typical SSD SATA drive you can get around 400 MB/sec for read and writing speed. USB3 overhead it is the limiting factor here, because those drives could easily reach 5XX MB/sec of read speeds (in this case the limiting factor it is the SATA bus, this is the reason Apple is mounting PCIe SSD drives in their laptops and some desktops). Here you have also a test using one unique drive:
http://macperformanceguide.com/Reviews-OWC-EliteProDual-TB-USB3-Thunderbolt-vs-USB3.html where thunderbolt gets the same speed as USB3 (well, it is a RAID 0 configuration, so, practically it is just like one drive).
One unique SSD SATA drive connected to a Thunderbolt 1 or 2 it is not going to get better speeds than USB3, probably it could reach 5XX MB/sec but not much more, since the limiting factor it is, again, the SATA bus.
Now, if you buy a raid enclouse, and you put SSD drives on it, you can see here you can get around 800 MB/sec
http://macperformanceguide.com/Reviews-OWC-Thunderbay-RAID.html . The limiting factor it is not the bus, thunderbolt, but probably the drives or the RAID controller of the enclosure (and it is using software RAID).
If you connect a thunderbolt PCIe enclosure with a PCIe solid state drive you will probably reach even bigger speeds... not sure if there it is too much offer.